STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97487.1Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_5224 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes. (343 aa)    
Predicted Functional Partners:
AEV97486.1
Hypothetical protein; KEGG: cpi:Cpin_6899 conserved repeat domain protein; SPTR: Conserved repeat domain protein.
 
     0.889
AEV98510.1
KEGG: cpi:Cpin_1965 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AEW01330.1
PFAM: PKD domain; InterPro IPR000601; KEGG: cpi:Cpin_6939 PKD domain containing protein; PFAM: PKD; SMART: PKD; SPTR: PKD domain containing protein.
 
     0.760
AEW02454.1
PFAM: PKD domain; InterPro IPR000601; KEGG: cpi:Cpin_6939 PKD domain containing protein; PFAM: PKD; SPTR: PKD domain containing protein.
 
     0.759
AEW02312.1
PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: cpi:Cpin_0863 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
     0.758
AEW02816.1
KEGG: cpi:Cpin_1050 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AEW01889.1
KEGG: cpi:Cpin_0419 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
AEV99288.1
PFAM: PKD domain; InterPro IPR000601; KEGG: cpi:Cpin_6939 PKD domain containing protein; PFAM: PKD; SMART: PKD; SPTR: PKD domain containing protein.
 
     0.754
AEW02752.1
KEGG: cpi:Cpin_0842 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.745
AEV98891.1
KEGG: cpi:Cpin_3111 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.