Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEV97502.1 | AEV97503.1 | Niako_1127 | Niako_1128 | Hypothetical protein. | PFAM: Peptidase family M48; InterPro IPR001915; KEGG: chu:CHU_2164 M48 family peptidase; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family. | 0.562 |
AEV97502.1 | AEV97504.1 | Niako_1127 | Niako_1129 | Hypothetical protein. | WGR domain-containing protein; PFAM: WGR domain; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR008893; KEGG: chu:CHU_2163 DNA helicase; PFAM: WGR; SMART: WGR; SPTR: DNA helicase. | 0.471 |
AEV97503.1 | AEV97502.1 | Niako_1128 | Niako_1127 | PFAM: Peptidase family M48; InterPro IPR001915; KEGG: chu:CHU_2164 M48 family peptidase; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family. | Hypothetical protein. | 0.562 |
AEV97503.1 | AEV97504.1 | Niako_1128 | Niako_1129 | PFAM: Peptidase family M48; InterPro IPR001915; KEGG: chu:CHU_2164 M48 family peptidase; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family. | WGR domain-containing protein; PFAM: WGR domain; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR008893; KEGG: chu:CHU_2163 DNA helicase; PFAM: WGR; SMART: WGR; SPTR: DNA helicase. | 0.925 |
AEV97504.1 | AEV97502.1 | Niako_1129 | Niako_1127 | WGR domain-containing protein; PFAM: WGR domain; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR008893; KEGG: chu:CHU_2163 DNA helicase; PFAM: WGR; SMART: WGR; SPTR: DNA helicase. | Hypothetical protein. | 0.471 |
AEV97504.1 | AEV97503.1 | Niako_1129 | Niako_1128 | WGR domain-containing protein; PFAM: WGR domain; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR008893; KEGG: chu:CHU_2163 DNA helicase; PFAM: WGR; SMART: WGR; SPTR: DNA helicase. | PFAM: Peptidase family M48; InterPro IPR001915; KEGG: chu:CHU_2164 M48 family peptidase; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family. | 0.925 |