STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97611.1Transport-associated protein; PFAM: Putative phospholipid-binding domain; COGs: COG2823 periplasmic or secreted lipoprotein; InterPro IPR007055; KEGG: har:HEAR2337 hypothetical protein; PFAM: Transport-associated; SPTR: Transport-associated protein. (200 aa)    
Predicted Functional Partners:
AEW02062.1
UPF0391 membrane protein ytjA; PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: fjo:Fjoh_4310 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: Putative uncharacterized protein.
  
    0.669
AEV97610.1
KEGG: cpi:Cpin_1932 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.496
AEV96406.1
KEGG: ppn:Palpr_2634 CsbD family protein; SPTR: CsbD family protein.
  
  
 0.438
AEW02683.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: psn:Pedsa_0275 CsbD family protein; PFAM: CsbD-like; SPTR: CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.438
AEV98630.1
COGs: COG3467 flavin-nucleotide-binding protein; KEGG: cpi:Cpin_4880 pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
     0.424
AEV98552.1
Trehalose 6-phosphatase, trehalose 6-phosphate synthase; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR001830:IPR003337:IPR006379; KEGG: chu:CHU_0400 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; SPTR: Tre [...]
   
  
 0.414
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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