STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97668.1KEGG: fjo:Fjoh_4305 hypothetical protein; SPTR: Putative uncharacterized protein. (121 aa)    
Predicted Functional Partners:
AEV97669.1
Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: fjo:Fjoh_1711 3-demethylubiquinone-9 3-methyltransferase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.775
AEV98028.1
KEGG: dfe:Dfer_1267 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AEV97670.1
PFAM: DJ-1/PfpI family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR000005:IPR018060; KEGG: chu:CHU_3787 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family with amidase-like domain.
 
     0.666
AEV97803.1
KEGG: fjo:Fjoh_3998 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.604
AEV99742.1
PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: chu:CHU_2913 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein.
  
     0.545
AEV97667.1
PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: shg:Sph21_3024 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.
       0.428
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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