STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV97691.1Cell surface receptor IPT/TIG domain protein; PFAM: IPT/TIG domain; InterPro IPR002909; KEGG: cin:100186543 similar to novel gene similar to vertebrate polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 (PKHD1L1); PFAM: Cell surface receptor IPT/TIG; SPTR: IPT/TIG domain protein. (314 aa)    
Predicted Functional Partners:
AEV97690.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: lsp:Bsph_1898 ribosomal-protein-serine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase.
       0.550
AEV98435.1
PFAM: Oxidoreductase molybdopterin binding domain; COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: cpi:Cpin_2409 oxidoreductase molybdopterin binding; PFAM: Oxidoreductase, molybdopterin binding; SPTR: Oxidoreductase molybdopterin binding.
   
 
 0.489
AEW02698.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.454
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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