Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEV97939.1 | AEV98465.1 | Niako_1570 | Niako_2110 | Oxidoreductase; PFAM: BNR/Asp-box repeat; COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: cpi:Cpin_3100 oxidoreductase; SPTR: Oxidoreductase. | PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: psn:Pedsa_2693 protein of unknown function, Porph ging; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein. | 0.492 |
AEV97939.1 | AEW02857.1 | Niako_1570 | Niako_6633 | Oxidoreductase; PFAM: BNR/Asp-box repeat; COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: cpi:Cpin_3100 oxidoreductase; SPTR: Oxidoreductase. | KEGG: phe:Phep_3796 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.463 |
AEV98465.1 | AEV97939.1 | Niako_2110 | Niako_1570 | PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: psn:Pedsa_2693 protein of unknown function, Porph ging; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein. | Oxidoreductase; PFAM: BNR/Asp-box repeat; COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: cpi:Cpin_3100 oxidoreductase; SPTR: Oxidoreductase. | 0.492 |
AEW02857.1 | AEV97939.1 | Niako_6633 | Niako_1570 | KEGG: phe:Phep_3796 hypothetical protein; SPTR: Putative uncharacterized protein. | Oxidoreductase; PFAM: BNR/Asp-box repeat; COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: cpi:Cpin_3100 oxidoreductase; SPTR: Oxidoreductase. | 0.463 |