STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98030.1Hypothetical protein; InterPro IPR006311; KEGG: cpi:Cpin_3454 hypothetical protein; SPTR: Putative uncharacterized protein. (640 aa)    
Predicted Functional Partners:
AEV98273.1
InterPro IPR006104; KEGG: shg:Sph21_0445 glycoside hydrolase family 2 sugar binding protein; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; SPTR: Putative uncharacterized protein.
  
     0.601
AEV98504.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005835:IPR001451:IPR011831; KEGG: phe:Phep_3085 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; PRIAM: Glucose-1-phosphate adenylyltransferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase.
   
    0.570
AEV97094.1
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
     0.531
AEV99958.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; COGs: COG3347 conserved hypothetical protein; InterPro IPR001303:IPR002198:IPR013454; KEGG: cpi:Cpin_4925 short chain dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcoho [...]
 
 
 0.501
AEW01617.1
KEGG: psn:Pedsa_0506 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
AEV98029.1
Glycosidase related protein; PFAM: Domain of unknown function (DUF377); COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: bth:BT_4094 hypothetical protein; PFAM: Glycosidase, PH1107-related; SPTR: Putative uncharacterized protein.
       0.482
AEW01608.1
Hypothetical protein; PFAM: Alginate lyase; KEGG: phe:Phep_2696 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.470
AEV99959.1
PFAM: L-rhamnose-proton symport protein (RhaT); InterPro IPR010476; KEGG: dfe:Dfer_4532 rhamnose-proton symporter; PFAM: RhaT l-rhamnose-proton symport 2; SPTR: RhaT l-rhamnose-proton symport 2.
 
 
   0.459
AEW01611.1
Beta-galactosidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103; KEGG: phe:Phep_2700 beta-galactosidase; PFAM: Glycoside hydrolase family 2, TIM barrel; Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase.
 
 
 0.458
AEV96924.1
PFAM: Glycosyl hydrolases family 38 C-terminal domain; InterPro IPR011682; KEGG: cpi:Cpin_2421 glycosyl hydrolase 38 domain protein; PFAM: Glycosyl hydrolases 38, C-terminal; SPTR: Glycosyl hydrolase 38 domain protein.
  
   
 0.441
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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