STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98030.1Hypothetical protein; InterPro IPR006311; KEGG: cpi:Cpin_3454 hypothetical protein; SPTR: Putative uncharacterized protein. (640 aa)    
Predicted Functional Partners:
AEV98273.1
InterPro IPR006104; KEGG: shg:Sph21_0445 glycoside hydrolase family 2 sugar binding protein; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; SPTR: Putative uncharacterized protein.
  
     0.601
AEV97094.1
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
     0.531
AEW01617.1
KEGG: psn:Pedsa_0506 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
AEV98029.1
Glycosidase related protein; PFAM: Domain of unknown function (DUF377); COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: bth:BT_4094 hypothetical protein; PFAM: Glycosidase, PH1107-related; SPTR: Putative uncharacterized protein.
       0.482
AEW01608.1
Hypothetical protein; PFAM: Alginate lyase; KEGG: phe:Phep_2696 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.470
AEV99959.1
PFAM: L-rhamnose-proton symport protein (RhaT); InterPro IPR010476; KEGG: dfe:Dfer_4532 rhamnose-proton symporter; PFAM: RhaT l-rhamnose-proton symport 2; SPTR: RhaT l-rhamnose-proton symport 2.
 
 
   0.456
AEV96924.1
PFAM: Glycosyl hydrolases family 38 C-terminal domain; InterPro IPR011682; KEGG: cpi:Cpin_2421 glycosyl hydrolase 38 domain protein; PFAM: Glycosyl hydrolases 38, C-terminal; SPTR: Glycosyl hydrolase 38 domain protein.
  
     0.441
AEV99811.1
InterPro IPR006104; KEGG: phe:Phep_3886 family 2 glycoside hydrolase; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; SPTR: Glycoside hydrolase family 2 sugar binding.
  
     0.421
AEV98027.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: dfe:Dfer_1018 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
       0.402
AEV98028.1
KEGG: dfe:Dfer_1267 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.402
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.