STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98181.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AEV98182.1
Uncharacterized conserved protein UCP029037; PFAM: Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310); COGs: COG5595 Zn-ribbon-containing possibly nucleic-acid-binding protein; InterPro IPR016908; KEGG: dae:Dtox_1984 Zn-ribbon-containing protein; PFAM: Uncharacterised conserved protein UCP029037; SPTR: Zn-ribbon-containing protein.
       0.686
AEV98183.1
PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: aba:Acid345_0971 amidohydrolase 3; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase 3.
       0.671
AEV98180.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; Cytochrome D1 heme domain; COGs: COG2319 FOG: WD40 repeat; InterPro IPR015032:IPR019781:IPR001680; KEGG: mba:Mbar_A2862 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; MTH538 TIR-like domain; SPTR: WD-40 repeat-containing protein.
       0.470
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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