STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98381.1InterPro IPR019734:IPR001440; KEGG: cpi:Cpin_5454 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide domain protein. (231 aa)    
Predicted Functional Partners:
AEW00811.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR013105:IPR011659:IPR006665; KEGG: cpi:Cpin_0547 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Tetratricopeptide TPR2; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein.
 
  
 0.817
AEV97859.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: psn:Pedsa_3690 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein.
  
  
 0.794
AEW02566.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: cpi:Cpin_0741 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
 
  
 0.787
AEW01714.1
PFAM: Protein of unknown function (DUF2795); KEGG: cpi:Cpin_6891 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AEW02818.1
PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: cpi:Cpin_1052 surface antigen variable number repeat protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen variable number repeat protein.
  
    0.765
AEV99252.1
PFAM: Protein of unknown function (DUF2723); KEGG: cpi:Cpin_4667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
AEV97599.1
COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: cpi:Cpin_6190 organic solvent tolerance protein OstA; SPTR: Putative organic solvent tolerance protein OstA.
 
   
 0.754
lspA
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
     0.753
AEV98364.1
PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: cpi:Cpin_1674 surface antigen (D15); PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen (D15).
  
    0.745
AEW02095.1
PFAM: Protein of unknown function (DUF2723); KEGG: cpi:Cpin_4667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.