STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98405.1beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: dfe:Dfer_5434 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Beta-Ig-H3/fasciclin. (186 aa)    
Predicted Functional Partners:
AEV99299.1
PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase I, D subunit; COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; InterPro IPR010218:IPR010219:IPR001268:IPR001135; KEGG: cpi:Cpin_3823 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit; SPTR: NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogena [...]
    
 
 0.903
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
    
 
 0.658
nuoD-2
NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
    
 
 0.658
AEV98406.1
Uncharacterized protein family UPF0310; PFAM: Protein of unknown function DUF55; COGs: COG2947 conserved hypothetical protein; InterPro IPR002740; KEGG: chu:CHU_0082 hypothetical protein; PFAM: Uncharacterised protein family UPF0310; SPTR: Putative uncharacterized protein.
 
     0.571
AEV98404.1
KEGG: cat:CA2559_12228 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.536
AEV98403.1
KEGG: cat:CA2559_12223 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.426
AEW01313.1
Deoxyribodipyrimidine photo-lyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: cpi:Cpin_6960 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photo-lyase; manually curated.
 
  
 0.421
AEW01977.1
PFAM: Anti-sigma-K factor rskA; InterPro IPR018764; KEGG: cpi:Cpin_1908 hypothetical protein; PFAM: Anti-sigma K factor RskA; SPTR: Putative uncharacterized protein.
 
   
 0.409
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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