STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98669.1PFAM: Ornithine cyclodeaminase/mu-crystallin family; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnB; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: bbe:BBR47_31890 hypothetical protein; PFAM: Ornithine cyclodeaminase/mu-crystallin; SPTR: Putative uncharacterized protein. (321 aa)    
Predicted Functional Partners:
AEV98680.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnA; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: bbe:BBR47_31900 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Pyridoxal-phosphate dependent enzyme.
 
 
 0.952
AEV98670.1
Hypothetical protein; PFAM: Mannosyltransferase putative; KEGG: ipa:Isop_2421 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AEV98672.1
PFAM: Thioesterase domain; COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: fjo:Fjoh_2099 thioesterase; PFAM: Thioesterase; SPTR: Thioesterase (Type II).
 
     0.770
AEV98674.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR010071:IPR 010060; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Non-ribosomal peptide synthase; TIGRFAM: Amino acid adenylation; Non-ribo [...]
 
   
 0.748
AEV98668.1
Methyltransferase FkbM family; PFAM: Met-10+ like-protein; TIGRFAM: methyltransferase, FkbM family; InterPro IPR003402:IPR006342; KEGG: cle:Clole_3810 methyltransferase FkbM family; PFAM: Protein of unknown function Met10; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM.
       0.746
AEV98673.1
Protein of unknown function DUF2070, membrane; PFAM: Metallo-beta-lactamase superfamily; Predicted membrane protein (DUF2070); COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; InterPro IPR019204; KEGG: cpi:Cpin_5192 hypothetical protein; PFAM: Protein of unknown function DUF2070, membrane; SPTR: Putative uncharacterized protein.
 
     0.734
AEV98675.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase., o-succinylbenzoate--CoA ligase; SPTR: Tyrocidine synthase 3; TIGRFAM: Amino acid adenylation.
 
   
 0.678
AEV98671.1
KEGG: cpi:Cpin_5184 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.661
AEV98676.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Tyrocidine synthetase III; TIGRFAM: Amino acid adenylation.
 
   
 0.660
AEV98679.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: ppm:PPSC2_c0994 nonribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Aspartate racemase; SPTR: Nonribosomal peptide synthetase; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.578
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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