STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98711.1PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: cpi:Cpin_4241 glycoside hydrolase family 29 (alpha-L-fucosidase); PFAM: Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Glycoside hydrolase family 29 (Alpha-L-fucosidase). (539 aa)    
Predicted Functional Partners:
AEV98712.1
PFAM: Domain of unknown function (DUF718); InterPro IPR008000; KEGG: dfe:Dfer_5741 protein of unknown function DUF718; PFAM: Rhamnose mutarotase; SPTR: Putative uncharacterized protein.
 
    0.852
AEV97064.1
Glycoside hydrolase family 29 (alpha-L-fucosidase); PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: psn:Pedsa_3615 glycoside hydrolase family 29 (alpha-L-fucosidase); PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Glycoside hydrolase family 29 (Alpha-L-fucosidase).
  
     0.732
AEV98607.1
PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000421:IPR000933; KEGG: cpi:Cpin_6474 coagulation factor 5/8 type domain protein; PFAM: Coagulation factor 5/8 type, C-terminal; SMART: Glycoside hydrolase, family 29; SPTR: Coagulation factor 5/8 type domain protein.
  
     0.711
AEV98716.1
Xylan 1,4-beta-xylosidase; PFAM: Glycosyl hydrolases family 39; COGs: COG3664 Beta-xylosidase; InterPro IPR000514; KEGG: ppn:Palpr_2118 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 39; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan 1,4-beta-xylosidase.
 
     0.572
AEV98730.1
PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR000005:IPR018060; KEGG: zpr:ZPR_4364 bacterial regulatory helix-turn-helix protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Bacterial regulatory helix-turn-helix protein.
 
     0.506
AEV98715.1
PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: sli:Slin_1415 coagulation factor 5/8 type domain protein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Coagulation factor 5/8 type domain protein.
 
     0.472
AEV97381.1
PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: cpi:Cpin_7232 hypothetical protein; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein.
  
     0.471
AEV99942.1
Xylan 1,4-beta-xylosidase; PFAM: Glycosyl hydrolases family 39; COGs: COG3664 Beta-xylosidase; InterPro IPR000514; KEGG: dfe:Dfer_5268 glycoside hydrolase family 39; PFAM: Glycoside hydrolase, family 39; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase family 39.
  
     0.462
AEV98713.1
PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase; COGs: COG1874 Beta-galactosidase; InterPro IPR013529:IPR013738; KEGG: tsa:AciPR4_2660 beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase.
    
 0.456
AEW02707.1
L-iditol 2-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: dfe:Dfer_5642 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; PRIAM: L-iditol 2-dehydrogenase; SPTR: Alcohol dehydrogenase GroES domain protein.
 
     0.454
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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