STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98834.1KEGG: cpi:Cpin_6432 hypothetical protein; SPTR: Putative uncharacterized protein. (206 aa)    
Predicted Functional Partners:
AEV96521.1
KEGG: cpi:Cpin_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
AEV96522.1
KEGG: cpi:Cpin_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.656
AEV98835.1
KEGG: fjo:Fjoh_3824 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.639
AEV97307.1
KEGG: cpi:Cpin_5569 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.585
AEV97525.1
KEGG: coc:Coch_2122 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.503
AEV98833.1
Putative PAS/PAC sensor protein; PFAM: His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR013767; KEGG: mba:Mbar_A3250 sensory transduction histidine kinase; PFAM: PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS.
       0.455
AEW01037.1
PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: ssm:Spirs_4290 putative transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative transcriptional regulator.
  
    0.452
AEW02604.1
PFAM: Protein of unknown function (DUF3127); KEGG: chu:CHU_3583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.433
AEV98645.1
KEGG: fps:FP2138 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.418
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.