STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98861.1KEGG: cyj:Cyan7822_6599 rifampin ADP-ribosyl transferase; SPTR: Putative rifampin ADP-ribosyl transferase. (141 aa)    
Predicted Functional Partners:
AEV99100.1
Hypothetical protein; Alpha-ketoglutarate-dependent dioxygenase that in vitro catalyzes the regio- and stereoselective hydroxylation of L-lysine, leading to (4R)-4-hydroxy-L-lysine.
  
     0.554
AEV98860.1
Hypothetical protein.
       0.549
AEW02193.1
PFAM: Heme oxygenase; COGs: COG3230 Heme oxygenase; InterPro IPR016053; KEGG: phe:Phep_3915 heme oxygenase; PFAM: Haem oxygenase-like; SPTR: Heme oxygenase.
  
     0.518
AEW00352.1
PFAM: Hemerythrin HHE cation binding domain; InterPro IPR012312; KEGG: bra:BRADO4645 hypothetical protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Putative uncharacterized protein.
  
     0.497
AEV98315.1
Hypothetical protein; COGs: COG3230 Heme oxygenase; KEGG: phe:Phep_3915 heme oxygenase; SPTR: Heme oxygenase.
  
     0.496
AEW01846.1
TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284; KEGG: phe:Phep_3304 sigma-70 family RNA polymerase sigma factor; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70.
  
     0.483
AEW01434.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: phe:Phep_1490 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.445
AEW01667.1
ATPase AAA-2 domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; InterProIPR006935:IPR013093:IPR001650:IPR014001:IPR 003593; KEGG: tgr:Tgr7_3181 helicase domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; SPTR: Putative Helicase domain protein.
  
     0.440
AEV98768.1
Hypothetical protein; KEGG: cpi:Cpin_3623 outer membrane adhesin like protein; SPTR: VCBS.
  
     0.403
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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