STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98934.1TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); COGs: COG3209 Rhs family protein; KEGG: cpi:Cpin_6418 hypothetical protein; SPTR: RHS family protein; TIGRFAM: RHS repeat-associated core domain. (338 aa)    
Predicted Functional Partners:
AEV98935.1
YD repeat-containing protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies); COGs: COG3209 Rhs family protein; InterPro IPR006530; KEGG: cpi:Cpin_4580 hypothetical protein; PFAM: YD repeat; SPTR: YD repeat protein.
     0.988
AEV98938.1
Rhs element Vgr protein; PFAM: Phage late control gene D protein (GPD); Phage-related baseplate assembly protein; COGs: COG3501 conserved hypothetical protein; InterPro IPR006533; KEGG: cpi:Cpin_6416 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein.
 
  
 0.835
AEV98939.1
KEGG: cpi:Cpin_6413 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.797
AEV98940.1
KEGG: cao:Celal_3749 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.786
AEV98942.1
KEGG: fjo:Fjoh_3267 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.762
AEW03380.1
Rhs element Vgr protein; PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); TIGRFAM: Rhs element Vgr protein; COGs: COG3501 conserved hypothetical protein; InterPro IPR006533; KEGG: cpi:Cpin_6416 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein.
 
  
 0.750
AEV98933.1
Hypothetical protein.
       0.746
AEV98947.1
KEGG: cpi:Cpin_2310 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.744
AEV98941.1
PFAM: Protein of unknown function (DUF877); KEGG: cpi:Cpin_2302 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.743
AEV98950.1
KEGG: cpi:Cpin_2305 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
  
 0.741
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.