STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98958.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_5287 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor. (1010 aa)    
Predicted Functional Partners:
AEV98959.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_4781 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR.
 
    0.782
AEW03023.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: cpi:Cpin_2739 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
    0.552
AEV96796.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: cpi:Cpin_1306 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
    0.514
AEW03341.1
KEGG: cpi:Cpin_0171 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
AEV98960.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: sli:Slin_4780 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-7 [...]
  
    0.492
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.486
AEV96656.1
PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: ppn:Palpr_2646 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28.
  
     0.465
AEW00944.1
Dipeptidyl-peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: shg:Sph21_0993 dipeptidyl-peptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Peptidase S9B dipeptidylpeptidase IV domain protein.
  
     0.463
AEV96797.1
KEGG: shg:Sph21_3438 OmpA-related protein; SPTR: OmpA-related protein.
  
     0.430
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.