STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV98982.1KEGG: cly:Celly_2772 hypothetical protein; SPTR: Putative uncharacterized protein. (208 aa)    
Predicted Functional Partners:
AEV98983.1
Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: psn:Pedsa_1408 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family.
       0.709
AEV98984.1
Uncharacterized protein family UPF0324; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG2855 membrane protein; InterPro IPR018383; KEGG: sli:Slin_6940 uncharacterized protein family UPF0324; PFAM: Uncharacterised protein family UPF0324, prokaryote; SPTR: Uncharacterized protein family UPF0324.
       0.558
AEV98981.1
KEGG: psn:Pedsa_1872 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.420
AEV98985.1
Hypothetical protein.
       0.416
AEV98986.1
Hypothetical protein.
       0.414
AEV98987.1
Hypothetical protein.
       0.407
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.