STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99221.1Pirin domain protein; PFAM: Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829; KEGG: cat:CA2559_09076 possible pirin family protein; PFAM: Pirin, N-terminal; SPTR: Possible Pirin family protein; Belongs to the pirin family. (237 aa)    
Predicted Functional Partners:
AEW02133.1
PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: cpi:Cpin_5014 pirin; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin domain protein; Belongs to the pirin family.
 
     0.629
AEV97848.1
PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; COGs: COG3384 conserved hypothetical protein; InterPro IPR004183; KEGG: cpi:Cpin_4445 extradiol ring-cleavage dioxygenase class III protein subunit B; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; SPTR: Extradiol ring-cleavage dioxygenase class III protein subunit B.
 
  
 0.594
AEV98015.1
PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: sli:Slin_0879 pirin; PFAM: Pirin, C-terminal; Pirin, N-terminal; SPTR: Pirin domain protein; Belongs to the pirin family.
 
     0.571
AEV99220.1
PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: mlo:mll8386 oxido-reductase, and dehydratase MocA; PFAM: Aldo/keto reductase; SPTR: Oxido-reductase, and dehydratase; MocA.
       0.503
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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