STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99529.1RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_1551 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein. (502 aa)    
Predicted Functional Partners:
AEV99528.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_1552 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
 
     0.931
AEW00026.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6451 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
     0.761
AEW00298.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_4497 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein.
  
     0.751
AEV99098.1
PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: cpi:Cpin_4624 hypothetical protein; PFAM: Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; manually curated.
  
     0.749
AEW02894.1
Hypothetical protein; KEGG: cth:Cthe_2679 tetratricopeptide TPR_2; SPTR: Tetratricopeptide TPR_2.
  
     0.726
AEV99093.1
KEGG: cpi:Cpin_1340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
AEV99843.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_0004 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
     0.673
AEV97488.1
KEGG: cpi:Cpin_2619 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.669
AEV98600.1
KEGG: cpi:Cpin_2392 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.655
AEV98063.1
InterPro IPR000601; KEGG: cly:Celly_3100 PKD domain-containing protein; PFAM: PKD; SMART: PKD; SPTR: Putative surface layer protein B.
  
     0.638
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.