STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99536.1Cell surface receptor IPT/TIG domain protein; PFAM: IPT/TIG domain; NHL repeat; InterPro IPR002909:IPR001258; KEGG: phe:Phep_1359 NHL repeat containing protein; PFAM: Cell surface receptor IPT/TIG; NHL repeat; SPTR: NHL repeat containing protein. (500 aa)    
Predicted Functional Partners:
AEV99535.1
KEGG: dfe:Dfer_3726 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.523
AEV96625.1
PFAM: Papain family cysteine protease; COGs: COG4870 Cysteine protease; InterPro IPR000668; KEGG: pin:Ping_1673 peptidase C1A, papain; PFAM: Peptidase C1A, papain C-terminal; PRIAM: Dipeptidyl-peptidase I; SMART: Peptidase C1A, papain C-terminal; SPTR: Dipeptidyl-peptidase 1.
  
    0.416
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.