STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99550.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_0939 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein. (1094 aa)    
Predicted Functional Partners:
AEV99549.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_2167 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein.
 
     0.947
AEV96442.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_2167 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein.
 
     0.784
AEV99217.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0940 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
 
     0.784
AEV99000.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2836 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.703
AEV98823.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2218 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: Outer membrane protein.
  
     0.676
AEW02618.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2268 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.648
AEV97199.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: pru:PRU_2713 putative lipoprotein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein.
  
     0.647
AEV97590.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bfr:BF0439 hypothetical protein; PFAM: RagB/SusD; SPTR: Conserved hypothetical lipoprotein.
  
     0.636
AEV98192.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0479 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.634
AEW01633.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: phe:Phep_0711 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.632
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.