STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99591.1Dihydrodipicolinate reductase; PFAM: short chain dehydrogenase; InterPro IPR000846; KEGG: cpi:Cpin_5629 short chain dehydrogenase; PFAM: Dihydrodipicolinate reductase; SPTR: Short-chain dehydrogenase/reductase SDR. (198 aa)    
Predicted Functional Partners:
AEV99299.1
PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase I, D subunit; COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; InterPro IPR010218:IPR010219:IPR001268:IPR001135; KEGG: cpi:Cpin_3823 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit; SPTR: NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogena [...]
   
 
 0.824
AEW00110.1
KEGG: dfe:Dfer_1265 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.487
AEV99590.1
Hypothetical protein.
       0.468
AEV98224.1
1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611:IPR017583; KEGG: dfe:Dfer_4571 1-phosphofructokinase; PFAM: Carbohydrate/purine kinase; PRIAM: 6-phosphofructokinase; SPTR: 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase.
   
  
 0.454
AEV98674.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR010071:IPR 010060; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Non-ribosomal peptide synthase; TIGRFAM: Amino acid adenylation; Non-ribo [...]
 
 
 0.449
AEW01321.1
(Acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: cpi:Cpin_6954 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.444
AEV98679.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: ppm:PPSC2_c0994 nonribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Aspartate racemase; SPTR: Nonribosomal peptide synthetase; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.443
AEW02658.1
PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: cpi:Cpin_0600 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28.
  
 0.405
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.