STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99700.1PFAM: TraG/TraD family; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: cpi:Cpin_6326 TraG family protein; PFAM: TRAG protein; SPTR: TRAG family protein. (670 aa)    
Predicted Functional Partners:
AEW02342.1
PFAM: TraG/TraD family; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: cpi:Cpin_6326 TraG family protein; PFAM: TRAG protein; SPTR: TRAG family protein.
  
  
 
0.925
AEW02349.1
PFAM: Domain of unknown function (DUF1738); COGs: COG4227 Antirestriction protein; InterPro IPR013610; KEGG: cpi:Cpin_6336 hypothetical protein; PFAM: Domain of unknown function DUF1738; SPTR: Putative uncharacterized protein.
 
    0.719
AEV99696.1
InterPro IPR005094; KEGG: cpi:Cpin_6324 hypothetical protein; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: Putative uncharacterized protein.
 
   
 0.714
AEV99697.1
PFAM: Bacterial mobilisation protein (MobC); Ribbon-helix-helix protein, copG family; InterPro IPR014795:IPR008687; KEGG: cpi:Cpin_6325 mobilisation protein; PFAM: Bacterial mobilisation; Protein of unknown function DUF1778; SPTR: Mobilization protein.
 
     0.639
AEW02339.1
Hypothetical protein; PFAM: Relaxase/Mobilisation nuclease domain; KEGG: cpi:Cpin_6324 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
   
 0.637
AEV97455.1
PFAM: HNH endonuclease; Protein of unknown function DUF262; InterPro IPR003615:IPR004919; KEGG: cbb:CLD_0522 hypothetical protein; PFAM: Protein of unknown function DUF262; SMART: HNH nuclease; SPTR: Putative uncharacterized protein.
   
 
 0.617
AEW01660.1
TIGRFAM: TIGR02646 family protein; KEGG: mar:MAE_48860 HNH endonuclease family protein; SPTR: Putative uncharacterized protein.
   
 
 0.617
AEW02409.1
KEGG: cpi:Cpin_0027 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.617
AEV99699.1
Hypothetical protein.
       0.511
AEW02348.1
PFAM: TrwC relaxase; Viral (Superfamily 1) RNA helicase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR014862; KEGG: sli:Slin_1976 conjugative relaxase domain protein; PFAM: TrwC relaxase; SPTR: Conjugative relaxase domain protein.
 
   
 0.429
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.