STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99751.1KEGG: cpi:Cpin_1887 hypothetical protein; SPTR: Putative uncharacterized protein. (533 aa)    
Predicted Functional Partners:
AEV99750.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662:IPR012910:IPR000531; KEGG: shg:Sph21_2446 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
 
     0.922
AEW03363.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910; KEGG: bvu:BVU_0126 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; SPTR: Putative outer membrane protein.
  
     0.591
AEV99749.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cpi:Cpin_2672 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR.
 
     0.564
AEV97518.1
parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: cpi:Cpin_2030 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: ParB-like partition protein; TIGRFAM: ParB-like partition protein; Belongs to the ParB family.
  
 
 0.559
AEV97726.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_4813 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
 
   0.546
AEW03364.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_0125 hypothetical protein; PFAM: RagB/SusD; SPTR: Outer membrane protein.
  
 
   0.534
AEV99134.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_2388 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: SusD family.
  
 
   0.530
AEV98281.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_3325 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
 
   0.519
AEV99135.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: psn:Pedsa_2389 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
  
     0.488
AEV97722.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_4817 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; manually curated.
  
 
   0.487
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.