STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV99921.1Hypothetical protein; TIGRFAM: RHS repeat-associated core domain; KEGG: cpi:Cpin_4225 hypothetical protein; SPTR: Putative uncharacterized protein. (789 aa)    
Predicted Functional Partners:
AEV99390.1
Hypothetical protein; KEGG: phe:Phep_1097 YD repeat-containing protein; SPTR: Possible YD repeat-containing protein.
 
     0.777
AEV99382.1
KEGG: cpi:Cpin_4387 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.775
AEV99920.1
Hypothetical protein.
       0.773
AEW03414.1
YD repeat protein; InterPro IPR006530; KEGG: cpi:Cpin_2075 hypothetical protein; SPTR: YD repeat protein; TIGRFAM: YD repeat.
 
     0.751
AEW03406.1
YD repeat protein; InterPro IPR006530; KEGG: cpi:Cpin_2075 hypothetical protein; SPTR: YD repeat protein; TIGRFAM: YD repeat.
 
     0.750
AEW03413.1
KEGG: cpi:Cpin_2075 hypothetical protein; SPTR: YD repeat protein.
 
     0.720
AEW02521.1
PFAM: Protein of unknown function (DUF1579); InterPro IPR011473; KEGG: cpi:Cpin_1703 hypothetical protein; PFAM: Protein of unknown function DUF1579; SPTR: Putative uncharacterized protein.
  
     0.689
AEW00194.1
KEGG: shg:Sph21_3265 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.652
AEW00195.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_3266 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein.
  
     0.608
AEW01369.1
UspA domain-containing protein; PFAM: Universal stress protein family; InterPro IPR006016; KEGG: llo:LLO_0957 universal stress family protein; PFAM: UspA; SPTR: Universal stress protein E.
  
     0.537
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.