STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW00189.1KEGG: mtt:Ftrac_2171 hypothetical protein; SPTR: Putative uncharacterized protein. (307 aa)    
Predicted Functional Partners:
AEV99281.1
Adenylate/guanylate cyclase with TPR repeats; PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG5616 integral membrane protein; InterPro IPR019734:IPR001054:IPR001440:IPR013105; KEGG: smd:Smed_2656 adenylyl cyclase class-3/4/guanylyl cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; PRIAM: Adenylate cyclase; SPTR: Adenylyl cyclase class-3/4/guanylyl cyclase.
  
 0.908
AEW00110.1
KEGG: dfe:Dfer_1265 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.897
AEV99299.1
PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase I, D subunit; COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; InterPro IPR010218:IPR010219:IPR001268:IPR001135; KEGG: cpi:Cpin_3823 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit; SPTR: NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogena [...]
   
 
 0.879
AEW01069.1
Helicase domain-containing protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330:IPR001650:IPR014001; KEGG: cly:Celly_2383 helicase domain-containing protein; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Putative ATP-dependent helicase.
  
 0.829
AEV99098.1
PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: cpi:Cpin_4624 hypothetical protein; PFAM: Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; manually curated.
  
 0.816
AEV97077.1
Adenosinetriphosphatase; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: cao:Celal_1635 microtubule-severing atpase; PFAM: ATPase, AAA-type, core; PRIAM: Adenosinetriphosphatase; SMART: ATPase, AAA+ type, core; SPTR: Cell division cycle protein 48-related protein.
   
 0.793
rpsC
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.762
AEV96498.1
PFAM: Mov34/MPN/PAD-1 family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: kva:Kvar_1653 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family.
    
 0.664
AEW02959.1
PFAM: ATPase family associated with various cellular activities (AAA); InterPro IPR003593; KEGG: cpi:Cpin_1073 ATPase AAA; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase.
  
 
 0.656
AEV99598.1
ATP-binding region ATPase domain protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003661:IPR003594:IPR001440; KEGG: cao:Celal_4238 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPT [...]
  
 0.632
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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