STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW00197.1PKD domain containing protein; PFAM: Reprolysin family propeptide; Reprolysin (M12B) family zinc metalloprotease; InterPro IPR001590:IPR000601; KEGG: psn:Pedsa_0803 hypothetical protein; PFAM: PKD; Peptidase M12B, ADAM/reprolysin; SMART: PKD; SPTR: Collagenase, putative. (843 aa)    
Predicted Functional Partners:
AEW00558.1
KEGG: dfe:Dfer_2655 spore coat protein CotH; SPTR: Spore coat protein CotH.
  
     0.744
AEW03233.1
KEGG: gca:Galf_0234 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.696
AEW03072.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: psn:Pedsa_2525 surface antigen (D15); PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen (D15).
  
     0.565
AEW02470.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: cpi:Cpin_0796 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein.
  
     0.550
AEW01193.1
Hypothetical protein; PFAM: CARDB; KEGG: mtt:Ftrac_3437 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.536
AEW00198.1
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.524
AEW01271.1
PFAM: CcmB protein; InterPro IPR003544; KEGG: cpi:Cpin_1522 cytochrome c biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB.
  
     0.461
AEW00857.1
PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: sli:Slin_2376 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
     0.453
AEW01194.1
KEGG: psn:Pedsa_0157 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.427
AEV97278.1
KEGG: psn:Pedsa_2881 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.