STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW00310.1KEGG: hwa:HQ1303A hypothetical protein; SPTR: Putative uncharacterized protein. (131 aa)    
Predicted Functional Partners:
AEV98674.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR010071:IPR 010060; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Non-ribosomal peptide synthase; TIGRFAM: Amino acid adenylation; Non-ribo [...]
 
 
 
 0.465
AEV98679.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: ppm:PPSC2_c0994 nonribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Aspartate racemase; SPTR: Nonribosomal peptide synthetase; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
 0.455
AEV98677.1
Long-chain-fatty-acid--(acyl-carrier-protein) ligase; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR006163; KEGG: syp:SYNPCC7002_A1979 AMP-binding enzyme; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; PRIAM: Long-chain-fatty-acid--[acyl-carrier-protein] ligase; SPTR: AMP-binding enzyme.
   
 
 0.453
AEW00579.1
PFAM: Protein of unknown function, DUF583; KEGG: mmh:Mmah_1606 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.420
AEW00309.1
Transport-associated protein; PFAM: Putative phospholipid-binding domain; COGs: COG2823 periplasmic or secreted lipoprotein; InterPro IPR007055:IPR014004; KEGG: ava:Ava_C0139 transport-associated protein; PFAM: Transport-associated; SPTR: Transport-associated protein.
       0.408
AEV98678.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Tyrocidine synthase 3; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 
 0.407
AEV98631.1
Hypothetical protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; KEGG: dps:DPPB41 hypothetical protein; SPTR: Predicted orf.
  
 
   0.405
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.