STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW00379.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cpi:Cpin_1097 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: Putative outer membrane protein. (1129 aa)    
Predicted Functional Partners:
AEW00378.1
Hypothetical protein; PFAM: SusD family; KEGG: cpi:Cpin_1098 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.947
AEV98595.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: osp:Odosp_2350 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein.
     0.778
AEW00344.1
Hypothetical protein; PFAM: SusD family; KEGG: cpi:Cpin_5146 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.777
AEV98594.1
KEGG: osp:Odosp_3534 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AEV98593.1
KEGG: osp:Odosp_1165 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AEV99416.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: osp:Odosp_2350 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein.
 
     0.770
AEV99418.1
Hypothetical protein; PFAM: SusD family; KEGG: osp:Odosp_1663 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AEW00377.1
KEGG: cpi:Cpin_1099 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.747
AEV98704.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: osp:Odosp_0455 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.745
AEW02091.1
ABC-type transporter, integral membrane subunit; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: aba:Acid345_4320 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
  
     0.668
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.