STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW00862.1Cell wall/surface repeat protein; PFAM: Carbohydrate binding module (family 6); TIGRFAM: Listeria/Bacterioides repeat; InterPro IPR013378:IPR006626:IPR005084; KEGG: cpi:Cpin_0079 cell wall/surface repeat protein; PFAM: Carbohydrate binding domain, family 6; PRIAM: Pectate disaccharide-lyase; SPTR: Cell wall/surface repeat protein; TIGRFAM: Listeria/Bacterioides repeat. (813 aa)    
Predicted Functional Partners:
AEW00861.1
Cell wall/surface repeat protein; PFAM: Pectate lyase; Carbohydrate binding module (family 6); TIGRFAM: Listeria/Bacterioides repeat; COGs: COG3866 Pectate lyase; InterPro IPR013378:IPR002022:IPR005084; KEGG: chu:CHU_1162 pectate lyase; PFAM: Pectate lyase/Amb allergen; Carbohydrate binding domain, family 6; SMART: Pectate lyase/Amb allergen; SPTR: CHU large protein; candidate pectate lyase, polysaccharide lyase family 1 protein; TIGRFAM: Listeria/Bacterioides repeat.
 
  
0.959
AEW01542.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: shg:Sph21_2885 pectinesterase; PFAM: Pectinesterase, catalytic; SPTR: Pectinesterase; manually curated.
  
 0.935
AEW02152.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: shg:Sph21_2885 pectinesterase; PFAM: Pectinesterase, catalytic; PRIAM: Pectinesterase; SPTR: Pectin methylesterase.
  
 0.933
AEV98197.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: bvu:BVU_1116 polysaccharide lyase family protein 10, pectate lyase; PFAM: Pectinesterase, catalytic; SPTR: Polysaccharide lyase family 10.
 
  
 0.915
AEV97122.1
PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: shg:Sph21_0475 hypothetical protein; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein.
  
  
  0.913
AEW00010.1
KEGG: ote:Oter_1331 WD40 domain-containing protein; SPTR: Putative uncharacterized protein.
     
  0.900
AEW02090.1
OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: aba:Acid345_4321 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein, OmpA/MotB family.
  
     0.693
AEV98717.1
PFAM: Cellulase (glycosyl hydrolase family 5); COGs: COG2730 Endoglucanase; InterPro IPR001547; KEGG: fjo:Fjoh_0774 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 5; SPTR: Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.692
AEV98114.1
Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: chu:CHU_1155 xyloglucanase; PFAM: BNR repeat; SPTR: CHU large protein; candidate xyloglucanase, glycoside hydrolase family 74 protein.
  
     0.669
AEV99093.1
KEGG: cpi:Cpin_1340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.646
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.