STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01002.1PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: shg:Sph21_3642 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase. (576 aa)    
Predicted Functional Partners:
AEW02477.1
KEGG: shg:Sph21_3640 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal.
 
 
 0.821
AEW00747.1
PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_3234 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein.
 
     0.733
AEW02483.1
PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: shg:Sph21_3962 xylose isomerase domain-containing protein TIM barrel; PFAM: AP endonuclease, family 2, C-terminal; Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel.
 
     0.711
AEW02480.1
PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: phe:Phep_3652 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel.
 
     0.702
AEW02482.1
PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: phe:Phep_3646 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein.
 
    0.630
AEV98180.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; Cytochrome D1 heme domain; COGs: COG2319 FOG: WD40 repeat; InterPro IPR015032:IPR019781:IPR001680; KEGG: mba:Mbar_A2862 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; MTH538 TIR-like domain; SPTR: WD-40 repeat-containing protein.
    
 0.604
AEW02485.1
PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: phe:Phep_3650 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase.
 
     0.598
AEV98291.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR006620:IPR001680:IPR019781; KEGG: hch:HCH_05588 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: Prolyl 4-hydroxylase, alpha subunit; WD40 repeat; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase family family.
    
 0.588
AEW01210.1
PFAM: G8 domain; PA14 domain; InterPro IPR019316:IPR011658; KEGG: cth:Cthe_0316 PA14; PFAM: PA14; G8 domain; SMART: PA14; SPTR: Putative uncharacterized protein.
    
 0.588
AEW02253.1
PFAM: Protein of unknown function (DUF3298); KEGG: cpi:Cpin_0885 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.588
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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