STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01004.1KEGG: sfu:Sfum_0885 hypothetical protein; SPTR: Hep_Hag family protein. (537 aa)    
Predicted Functional Partners:
AEW01003.1
Hypothetical protein; KEGG: plt:Plut_0367 VCBS; SPTR: VCBS.
 
     0.610
AEW02311.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: ppn:Palpr_1883 ppic-type peptidyL-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.475
AEV97278.1
KEGG: psn:Pedsa_2881 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.472
AEW00113.1
PFAM: Domain of unknown function (DUF1735); InterPro IPR013728; KEGG: sli:Slin_1164 hypothetical protein; PFAM: Domain of unknown function DUF1735; SPTR: Putative uncharacterized protein.
  
     0.429
AEW02685.1
KEGG: cpi:Cpin_3318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.