STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01037.1PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: ssm:Spirs_4290 putative transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative transcriptional regulator. (454 aa)    
Predicted Functional Partners:
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
  0.901
AEW01036.1
COGs: COG3593 ATP-dependent endonuclease of the OLD family; KEGG: drm:Dred_0870 ATP-dependent OLD family endonuclease; SPTR: ATP-dependent endonuclease of the OLD family-like protein.
  
    0.849
AEV99690.1
PFAM: Type I restriction modification DNA specificity domain; InterPro IPR000055; KEGG: mfe:Mefer_0543 N-6 DNA methylase; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Genome sequencing data, contig C300.
  
    0.794
AEV97456.1
Hypothetical protein; COGs: COG3593 ATP-dependent endonuclease of the OLD family; KEGG: dat:HRM2_44740 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.754
AEV98125.1
COGs: COG3593 ATP-dependent endonuclease of the OLD family; KEGG: pna:Pnap_0996 ATP-dependent OLD family endonuclease; SPTR: RecF/RecN/SMC N domain protein.
  
    0.754
AEV99216.1
NAD-dependent epimerase/dehydratase; PFAM: NmrA-like family; COGs: COG2910 Putative NADH-flavin reductase; InterPro IPR001509; KEGG: cbf:CLI_0359 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
    0.745
AEV97858.1
PFAM: Protein of unknown function (DUF1016); COGs: COG4804 conserved hypothetical protein; InterPro IPR009362; KEGG: chu:CHU_2940 hypothetical protein; PFAM: Protein of unknown function DUF1016; SPTR: Putative uncharacterized protein.
 
     0.602
AEV97472.1
PFAM: ORF6N domain; InterPro IPR018873; KEGG: bhl:Bache_0302 KilA-N, DNA-binding domain protein; PFAM: KilA-N, DNA-binding domain; SPTR: Putative uncharacterized protein.
 
     0.565
AEW01140.1
PFAM: ORF6N domain; InterPro IPR018873; KEGG: bhl:Bache_0302 KilA-N, DNA-binding domain protein; PFAM: KilA-N, DNA-binding domain; SPTR: Putative uncharacterized protein.
 
     0.551
AEW03398.1
COGs: COG3943 Virulence protein; KEGG: bli:BL02386 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.528
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.