STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01113.1KEGG: cpi:Cpin_5650 hypothetical protein; SPTR: Putative uncharacterized protein. (130 aa)    
Predicted Functional Partners:
AEV98865.1
Ig family protein; InterPro IPR008009; KEGG: cpi:Cpin_5223 hypothetical protein; PFAM: Putative Ig; SPTR: Putative uncharacterized protein.
  
     0.710
AEV99351.1
PFAM: PKD domain; InterPro IPR000601; KEGG: cpi:Cpin_4711 hypothetical protein; PFAM: PKD; SMART: PKD; SPTR: Putative uncharacterized protein.
  
     0.682
AEW01114.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: shg:Sph21_4401 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family.
 
     0.646
AEV98578.1
Hypothetical protein; PFAM: Esterase PHB depolymerase; KEGG: aba:Acid345_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.600
AEV97731.1
PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; COGs: COG0383 Alpha-mannosidase; InterPro IPR015341:IPR011682; KEGG: cpi:Cpin_4822 glycosyl hydrolase 38 domain protein; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, central region; SPTR: Glycosyl hydrolase 38 domain protein.
  
     0.583
AEV97725.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_4814 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
  
     0.566
AEW01115.1
COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060; KEGG: npu:Npun_F3132 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: YfiF.
  
   0.566
AEV97722.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_4817 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; manually curated.
  
     0.528
AEV97727.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_4812 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor.
  
     0.503
AEV98217.1
KEGG: cpi:Cpin_5353 secreted protein; SPTR: Putative secreted protein.
  
     0.495
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.