STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01119.1COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: phe:Phep_3168 acetyltransferase; SPTR: Acetyltransferase (Isoleucine patch superfamily). (191 aa)    
Predicted Functional Partners:
AEW01118.1
Peptidase S15; PFAM: X-Pro dipeptidyl-peptidase (S15 family); COGs: COG1073 Hydrolase of the alpha/beta superfamily; KEGG: sli:Slin_1950 peptidase S15; SPTR: Membrane protein; manually curated.
 
     0.796
AEW01117.1
PFAM: Cupin domain; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: fjo:Fjoh_3373 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel domain protein.
       0.649
AEW01120.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dfe:Dfer_0769 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.
 
     0.647
AEW01116.1
PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: ssm:Spirs_4181 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase.
 
    0.462
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.