STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01457.1PFAM: Alginate lyase; InterPro IPR014895; KEGG: sna:Snas_3336 alginate lyase 2; PFAM: Alginate lyase 2; SPTR: Alginate lyase 2. (251 aa)    
Predicted Functional Partners:
AEW01461.1
Poly(beta-D-mannuronate) lyase; TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626; KEGG: psn:Pedsa_0631 TonB-dependent receptor; PRIAM: Poly(beta-D-mannuronate) lyase; SPTR: TonB-dependent receptor.
 
     0.842
AEW01456.1
PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: psn:Pedsa_1192 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1.
 
     0.841
AEW01460.1
PFAM: Heparinase II/III-like protein; InterPro IPR012480; KEGG: psn:Pedsa_1196 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: Heparinase II/III family protein.
 
     0.831
AEW01455.1
3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: psn:Pedsa_1191 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR.
 
     0.830
AEW01458.1
Hypothetical protein; PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094:IPR001375; KEGG: psn:Pedsa_1194 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.788
AEV98768.1
Hypothetical protein; KEGG: cpi:Cpin_3623 outer membrane adhesin like protein; SPTR: VCBS.
  
   0.737
AEW01459.1
PFAM: Cupin domain; InterPro IPR013096; KEGG: psn:Pedsa_1195 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.
 
     0.693
AEV96670.1
KEGG: sco:SCO3496 lyase precursor; SPTR: Putative lyase.
 
     0.639
AEW01464.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_0629 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
 
   0.627
AEW01465.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: psn:Pedsa_0628 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
 
 
   0.615
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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