STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01473.1KEGG: bth:BT_0450 hypothetical protein; SPTR: Putative lipoprotein. (564 aa)    
Predicted Functional Partners:
AEW01472.1
Protein of unknown function DUF187; PFAM: Uncharacterised BCR, COG1649; COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: bth:BT_0447 sialic acid-specific 9-O-acetylesterase; PFAM: Protein of unknown function DUF187; SPTR: Putative lipoprotein.
  
    0.755
AEW01474.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: bth:BT_0451 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative lipoprotein.
       0.576
AEW01471.1
KEGG: psn:Pedsa_0021 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.540
AEW01475.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: bth:BT_3604 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug domain protein.
       0.535
AEW01476.1
PFAM: FAD binding domain; InterPro IPR003953; KEGG: psn:Pedsa_0016 FAD dependent oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Secreted protein.
       0.507
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.