STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01666.1NERD domain protein; PFAM: Nuclease-related domain; InterPro IPR011528; KEGG: fre:Franean1_2653 NERD domain-containing protein; PFAM: NERD; SPTR: NERD domain protein. (1103 aa)    
Predicted Functional Partners:
AEW01667.1
ATPase AAA-2 domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; InterProIPR006935:IPR013093:IPR001650:IPR014001:IPR 003593; KEGG: tgr:Tgr7_3181 helicase domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; SPTR: Putative Helicase domain protein.
       0.494
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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