STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01753.1PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sli:Slin_6009 efflux transporter RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (351 aa)    
Predicted Functional Partners:
AEW01752.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sli:Slin_6008 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.915
AEW01754.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cpi:Cpin_3983 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.
 
   0.908
AEV96782.1
Heavy metal efflux pump, CzcA family; PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: fps:FP0880 multidrug resistance protein precursor AcrB/AcrD/AcrF family protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein; TIGRFAM: Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.869
AEV99641.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: shg:Sph21_4633 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.837
AEV99639.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: shg:Sph21_4635 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.
 
   0.816
AEW01755.1
PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: sli:Slin_6011 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.
 
     0.699
AEV98908.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: cpi:Cpin_0365 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.678
AEW01357.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: dfe:Dfer_2174 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: Acriflavin resistance protein; SPTR: Multidrug efflux pump BpeF; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.543
AEV98266.1
Efflux transporter RND family, MFP subunit; PFAM: HlyD family secretion protein; COGs: COG0845 Membrane-fusion protein; KEGG: sli:Slin_1840 efflux transporter RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit.
  
     0.505
AEW02438.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036; KEGG: chu:CHU_1504 heavy metal efflux pump protein; PFAM: Acriflavin resistance protein; SPTR: CzcA family heavy metal efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.501
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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