STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW01767.1TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260:IPR003538; KEGG: lby:Lbys_3214 outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; SPTR: Putative uncharacterized protein; TIGRFAM: TonB, C-terminal. (253 aa)    
Predicted Functional Partners:
AEW03387.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: lby:Lbys_1876 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
 
 
 0.815
AEW00809.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cpi:Cpin_1734 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
 
 0.746
AEV99149.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: dfe:Dfer_4856 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
  
   0.650
AEW01768.1
Hypothetical protein; PFAM: HTH domain; COGs: COG1510 transcriptional regulator protein; KEGG: cpi:Cpin_7088 conserved hypothetical protein; transcriptional regulatory protein; SPTR: Putative uncharacterized protein; Belongs to the GbsR family.
       0.605
AEV99110.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cpi:Cpin_6148 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
 
 
 0.602
AEW00857.1
PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: sli:Slin_2376 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
   0.586
AEW01766.1
Outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260:IPR003538; KEGG: psn:Pedsa_2964 outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; SPTR: Outer membrane transport energization protein TonB TC 2.C.1.1.1); TIGRFAM: TonB, C-terminal; TC 2.C.1.1.1.
 
    
0.574
AEW02660.1
TonB-dependent receptor; InterPro IPR000531; KEGG: sli:Slin_1136 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor.
  
   0.565
AEW03074.1
PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: cpi:Cpin_0486 uroporphyrinogen III synthase HEM4; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen III synthase HEM4.
 
     0.563
AEW01863.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
    0.560
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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