STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02017.1PFAM: Protein of unknown function (DUF3109); KEGG: sli:Slin_0475 hypothetical protein; SPTR: Putative uncharacterized protein. (198 aa)    
Predicted Functional Partners:
AEW01714.1
PFAM: Protein of unknown function (DUF2795); KEGG: cpi:Cpin_6891 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AEW02015.1
KEGG: psn:Pedsa_3209 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.764
AEW02016.1
Iron-sulfur cluster binding protein; PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741:IPR004452; KEGG: cpi:Cpin_0932 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR: Putative uncharacterized protein; TIGRFAM: Iron-sulphur cluster binding protein.
       0.764
AEV98381.1
InterPro IPR019734:IPR001440; KEGG: cpi:Cpin_5454 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide domain protein.
  
     0.736
AEW03074.1
PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: cpi:Cpin_0486 uroporphyrinogen III synthase HEM4; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen III synthase HEM4.
 
     0.725
AEV97517.1
KEGG: cpi:Cpin_2029 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
AEV99252.1
PFAM: Protein of unknown function (DUF2723); KEGG: cpi:Cpin_4667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
AEW02818.1
PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: cpi:Cpin_1052 surface antigen variable number repeat protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen variable number repeat protein.
  
     0.697
AEW02095.1
PFAM: Protein of unknown function (DUF2723); KEGG: cpi:Cpin_4667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.696
AEW02018.1
Hypothetical protein; TIGRFAM: gliding motility-associated lipoprotein GldD; KEGG: cpi:Cpin_0934 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.661
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.