STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02147.1KEGG: chu:CHU_1800 hypothetical protein; SPTR: Putative uncharacterized protein. (336 aa)    
Predicted Functional Partners:
AEW02148.1
InterPro IPR011647; KEGG: paa:Paes_1248 KWG repeat-containing protein; PFAM: KWG Leptospira; SPTR: KWG repeat domain protein.
       0.705
AEV98578.1
Hypothetical protein; PFAM: Esterase PHB depolymerase; KEGG: aba:Acid345_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.704
AEV98865.1
Ig family protein; InterPro IPR008009; KEGG: cpi:Cpin_5223 hypothetical protein; PFAM: Putative Ig; SPTR: Putative uncharacterized protein.
  
     0.646
AEW01113.1
KEGG: cpi:Cpin_5650 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.480
AEW01761.1
PFAM: UbiA prenyltransferase family; InterPro IPR000537; KEGG: dfe:Dfer_2037 naringenin-chalcone synthase; PFAM: UbiA prenyltransferase; SPTR: Naringenin-chalcone synthase.
  
     0.480
AEW01855.1
Hypothetical protein; KEGG: sat:SYN_02742 putative cytoplasmic protein; SPTR: Putative uncharacterized protein.
  
     0.473
AEW02209.1
PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: chu:CHU_2226 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.
  
     0.449
AEV99275.1
PFAM: PA14 domain; InterPro IPR011658; KEGG: cpi:Cpin_4791 PA14 domain protein; PFAM: PA14; SMART: PA14; SPTR: PA14 domain protein.
  
     0.435
AEV99208.1
PFAM: PA14 domain; InterPro IPR011658; KEGG: cpi:Cpin_4791 PA14 domain protein; PFAM: PA14; SMART: PA14; SPTR: PA14 domain protein.
  
     0.411
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.