STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02340.1PFAM: Bacterial mobilisation protein (MobC); InterPro IPR014795:IPR008687; KEGG: cpi:Cpin_6325 mobilisation protein; PFAM: Bacterial mobilisation; Protein of unknown function DUF1778; SPTR: Mobilisation protein. (145 aa)    
Predicted Functional Partners:
AEW02339.1
Hypothetical protein; PFAM: Relaxase/Mobilisation nuclease domain; KEGG: cpi:Cpin_6324 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
    0.780
AEW02338.1
KEGG: cpi:Cpin_6321 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.608
AEW02342.1
PFAM: TraG/TraD family; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: cpi:Cpin_6326 TraG family protein; PFAM: TRAG protein; SPTR: TRAG family protein.
       0.511
AEW02341.1
Hypothetical protein.
       0.500
AEV98674.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR010071:IPR 010060; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Non-ribosomal peptide synthase; TIGRFAM: Amino acid adenylation; Non-ribo [...]
   
 
 0.479
AEV98679.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: ppm:PPSC2_c0994 nonribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Aspartate racemase; SPTR: Nonribosomal peptide synthetase; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.479
AEV97921.1
OmpA/MotB domain protein; PFAM: OmpA family; NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR001638:IPR006665; KEGG: hoh:Hoch_5086 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Extracellular solute-binding protein, family 3; SPTR: OmpA/MotB domain protein.
  
  
 0.439
AEV98675.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase., o-succinylbenzoate--CoA ligase; SPTR: Tyrocidine synthase 3; TIGRFAM: Amino acid adenylation.
   
 
 0.426
AEV98676.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Tyrocidine synthetase III; TIGRFAM: Amino acid adenylation.
   
 
 0.426
AEV98678.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR000873:IPR006163:IPR010071; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Tyrocidine synthase 3; TIGRFAM: Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.426
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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