STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02368.1TPR repeat-containing protein; PFAM: Protein of unknown function (DUF1260); KEGG: fjo:Fjoh_3682 TPR repeat-containing protein; SPTR: Putative uncharacterized protein. (125 aa)    
Predicted Functional Partners:
AEW02369.1
PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; InterPro IPR012894:IPR012893; KEGG: zpr:ZPR_4138 hypothetical protein; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; SPTR: Protein containing hipA-like C-terminal domain.
       0.467
AEW02370.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cpi:Cpin_2058 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: XRE family transcriptional regulator.
       0.467
AEW02367.1
Hypothetical protein.
       0.405
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.