STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02427.1Phenylacetic acid degradation protein PaaD; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736:IPR011973; KEGG: rmr:Rmar_1553 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Uncharacterized protein, possibly involved in aromatic compounds catabolism; TIGRFAM: Phenylacetic acid degradation protein PaaD; Phenylacetic acid degradation-related protein. (141 aa)    
Predicted Functional Partners:
AEW02429.1
PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744:IPR011883; KEGG: art:Arth_3215 phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Protein of unknown function DUF59; SPTR: Phenylacetate-CoA oxygenase, PaaJ subunit; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.994
AEW02431.1
PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; COGs: COG3460 Uncharacterized protein of phenylacetate metabolism; InterPro IPR009359; KEGG: dar:Daro_0378 phenylacetate-CoA oxygenase subunit PaaB; PFAM: Phenylacetic acid degradation B; SPTR: Phenylacetic acid degradation B; TIGRFAM: Phenylacetic acid degradation B.
 
 
 0.991
AEW02430.1
PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; COGs: COG3396 conserved hypothetical protein; InterPro IPR007814:IPR011882; KEGG: nve:NEMVE_v1g225432 hypothetical protein; PFAM: Phenylacetic acid catabolic; SPTR: Predicted protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.990
AEW02432.1
PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; COGs: COG3396 conserved hypothetical protein; InterPro IPR007814:IPR011881; KEGG: bmj:BMULJ_03031 phenylacetate-CoA oxygenase subunit PaaA; PFAM: Phenylacetic acid catabolic; SPTR: Phenylacetic acid degradation protein paaA; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.987
AEW02278.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041:IPR011884; KEGG: mmw:Mmwyl1_3091 phenylacetate-CoA oxygenase/reductase subunit PaaK; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; TIGRFAM: Phen [...]
 
 
  0.976
AEV97973.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: sli:Slin_5128 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein.
 
 
  0.944
AEW02428.1
PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: cat:CA2559_05310 enoyl-CoA hydratase/isomerase PhaB; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase PhaB.
 
 
 0.907
AEW02302.1
Phenylacetic acid degradation protein paaN; PFAM: MaoC like domain; Aldehyde dehydrogenase family; TIGRFAM: phenylacetic acid degradation protein paaN; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR002539:IPR011966; KEGG: cat:CA2559_05275 aldehyde dehydrogenase; PFAM: MaoC-like dehydratase; Aldehyde dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: NAD-dependent aldehyde dehydrogenases; TIGRFAM: Phenylacetic acid degradation protein paaN.
 
  
 0.842
plsX
Phosphate:acyl-(acyl carrier protein) acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.539
AEV98674.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR010071:IPR 010060; KEGG: ava:Ava_1613 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; PRIAM: Glutamate racemase; SPTR: Non-ribosomal peptide synthase; TIGRFAM: Amino acid adenylation; Non-ribo [...]
  
 
 0.412
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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