STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02928.1Ureidoglycolate lyase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: cpi:Cpin_1990 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: Ureidoglycolate lyase; SPTR:5-carboxymethyl-2-hydroxymuconateDelta-isomera se. (285 aa)    
Predicted Functional Partners:
AEW02923.1
3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_5738 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR.
 
 0.962
AEW02926.1
PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: fjo:Fjoh_4117 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2.
 
     0.821
AEW02927.1
PFAM: Domain of unknown function (DUF718); InterPro IPR008000; KEGG: dfe:Dfer_5741 protein of unknown function DUF718; PFAM: Rhamnose mutarotase; SPTR: Putative uncharacterized protein.
 
     0.813
AEW00734.1
PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: cpi:Cpin_5427 homogentisate 12-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase; SPTR: Homogentisate 12-dioxygenase.
  
  
 0.802
AEW02925.1
3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cpi:Cpin_1993 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR.
 
 
 0.791
AEW02929.1
Hypothetical protein.
       0.773
AEW02930.1
Cobalamin B12-binding domain protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158; KEGG: cpi:Cpin_1068 methylmalonyl-CoA mutase; PFAM: Cobalamin (vitamin B12)-binding; SPTR: Methylmalonyl-CoA mutase.
  
    0.575
AEW01533.1
Altronate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392; KEGG: psn:Pedsa_2720 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; PRIAM: Altronate dehydratase; SPTR: Altronate dehydratase.
 
     0.558
AEV99927.1
PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: mts:MTES_2576 metal-dependent hydrolase of the TIM-barrel fold; PFAM: Amidohydrolase 2; SPTR: Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.546
AEW02924.1
L-fucose transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: glucose/galactose transporter; L-fucose:H+ symporter permease; COGs: COG0738 Fucose permease; InterPro IPR005275:IPR005964:IPR011701; KEGG: phe:Phep_4021 L-fucose transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: L-fucose permease; TIGRFAM: L-fucose permease; Bacterial glucose/galactose transporter.
 
     0.545
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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