STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW02971.1PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451; KEGG: cpi:Cpin_4761 transferase hexapeptide repeat containing protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Transferase hexapeptide repeat containing protein. (190 aa)    
Predicted Functional Partners:
AEW01267.1
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: cpi:Cpin_1514 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.978
AEW02972.1
PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: cpi:Cpin_4760 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative uncharacterized protein.
 
   
 0.916
AEW02978.1
WxcM-like domain-containing protein; PFAM: WxcM-like, C-terminal; InterPro IPR008894; KEGG: psn:Pedsa_2804 WxcM-like domain-containing protein; PFAM: WxcM-like, C-terminal; SPTR: WxcM domain protein.
      0.913
AEV96579.1
PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: cpi:Cpin_1533 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase.
  
  
 0.807
AEW02983.1
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: cbe:Cbei_2597 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: QdtB; Belongs to the DegT/DnrJ/EryC1 family.
   
 0.799
AEW02968.1
PFAM: Transcription termination factor nusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645; KEGG: cpi:Cpin_2360 NusG antitermination factor; PFAM: Transcription antitermination protein, NusG, N-terminal; SMART: Transcription antitermination protein, NusG, N-terminal; SPTR: NusG antitermination factor.
  
  
 0.787
AEW02970.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: shg:Sph21_1810 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein.
       0.780
AEW02974.1
Teichoic-acid-transporting ATPase; PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_2772 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Teichoic-acid-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
       0.779
AEW02969.1
Soluble ligand binding domain protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: shg:Sph21_1809 soluble ligand binding domain; PFAM: Soluble ligand binding domain; SPTR: Polysaccharide export protein; manually curated.
       0.778
AEW02973.1
PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: sat:SYN_00825 O-antigen export system permease; PFAM: ABC-2 type transporter; SPTR: O-antigen export system permease protein.
       0.778
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.