STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03025.1PFAM: MarR family; AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: shg:Sph21_2789 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Lrp/AsnC family transcriptional regulator. (165 aa)    
Predicted Functional Partners:
AEW02713.1
PFAM: HTH domain; AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: cpi:Cpin_1012 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family.
  
     0.768
AEV96852.1
PFAM: HTH domain; AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR013196:IPR019887; KEGG: cpi:Cpin_3441 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; Helix-turn-helix, type 11; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family.
  
     0.742
AEW03024.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; InterPro IPR011701; KEGG: shg:Sph21_2788 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator family transporter.
       0.537
AEW03026.1
PFAM: IPT/TIG domain; InterPro IPR002909; KEGG: sma:SAV_5406 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; SPTR: Putative uncharacterized protein.
       0.439
AEV96509.1
Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: cpi:Cpin_0730 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
     
 0.420
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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