STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03276.1KEGG: cpi:Cpin_0824 hypothetical protein; SPTR: Putative uncharacterized protein. (559 aa)    
Predicted Functional Partners:
AEW03274.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: cpi:Cpin_0826 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein.
 
     0.906
AEW03275.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cpi:Cpin_0825 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
     0.873
AEW00212.1
Hypothetical protein; InterPro IPR006626; KEGG: cpi:Cpin_2195 PKD domain containing protein; SPTR: PKD domain containing protein.
  
     0.729
AEW01376.1
KEGG: cpi:Cpin_1420 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
hisS
PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: cpi:Cpin_7026 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup.
       0.714
AEV97953.1
KEGG: fbc:FB2170_14198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
AEW03278.1
PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: cat:CA2559_12743 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase.
       0.691
AEW03440.1
PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: cpi:Cpin_5268 hypothetical protein; PFAM: Peptidase M48, Ste24p; SPTR: Putative uncharacterized protein.
  
     0.688
AEV97867.1
Hypothetical protein; TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626:IPR003961; KEGG: cpi:Cpin_1738 PKD domain containing protein; SPTR: PKD domain containing protein.
  
     0.673
AEW00813.1
TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626; KEGG: cpi:Cpin_1738 PKD domain containing protein; SPTR: PKD domain containing protein; TIGRFAM: parallel beta-helix repeat.
  
     0.670
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.