STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03310.1Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: TPR repeat. (640 aa)    
Predicted Functional Partners:
AEV96741.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: cpi:Cpin_5432 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein.
 
     0.730
AEW03311.1
Hypothetical protein.
       0.540
AEW00094.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: fba:FIC_00631 tetratricopeptide repeat family protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
  
     0.477
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.476
AEV98180.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; Cytochrome D1 heme domain; COGs: COG2319 FOG: WD40 repeat; InterPro IPR015032:IPR019781:IPR001680; KEGG: mba:Mbar_A2862 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; MTH538 TIR-like domain; SPTR: WD-40 repeat-containing protein.
 
     0.457
AEW03312.1
PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: cpi:Cpin_6374 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.
       0.417
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.